Characterization of full-length enriched expressed sequence tags of dehydration-treated white fibrous roots of sweetpotato

Sun Hyung Kim, Wan Keun Song, Yun Hee Kim, Suk Yun Kwon, Haeng Soon Lee, In Chul Lee, Sang Soo Kwak

Research output: Contribution to journalArticlepeer-review

15 Scopus citations

Abstract

Sweetpotato (Ipomoea batatas (L). Lam.) is relatively tolerant to unfavorable growth conditions such as drought, yet has not been exploited to provide a better understanding of the molecular basis of drought stress tolerance. We obtained 983 highquality expressed sequence tags of 100 bp or longer (average length of 700 bp) from cDNA libraries of detached white fibrous root tissues by subjecting them to dehydration for 6 h. The 431 cDNAs were each assigned a function by alignment using the BLASTX algorithm. Among them, three genes associated with various abiotic stresses and nine genes not previously associated with drought stress were selected for expression pattern analysis through detailed reverse transcriptionpolymerase chain reaction. The direct and indirect relationships of the 12 genes with drought tolerance mechanisms were ascertained at different developmental stages and under various stress conditions.

Original languageEnglish
Pages (from-to)271-276
Number of pages6
JournalBMB Reports
Volume42
Issue number5
DOIs
StatePublished - May 2009

Keywords

  • Abiotic stress
  • Drought stress
  • Expressed sequence tag
  • Root
  • Sweetpotato

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