TY - JOUR
T1 - Comparison of the complete genomes of two Echinochloa species
T2 - barnyard grass and jungle rice
AU - Lee, Jeongran
AU - Kim, Jin Won
AU - Lee, In Yong
AU - Ahn, Jong Hwa
N1 - Publisher Copyright:
© 2017, © 2017 National Institute of Agricultural Sciences. Published by Informa UK Limited, trading as Taylor & Francis Group.
PY - 2017/12/12
Y1 - 2017/12/12
N2 - We sequenced and compared the complete chloroplast (cp) genomes of the two Echinochloa species; E. crus-galli (KT983256) and E. colona (KT983255). The size of complete chloroplast genomes of the two species are 139,851 and 139,592 base pairs in length, respectively. They include a pair of inverted repeats (22,640 and 22,618 bp) separated by the small (12,518 and 12,519 bp) and large (82,053 and 81,837 bp) single copy regions. Both chloroplast genomes include a total of 136 genes. Phylogenetic analysis revealed that E. colona was diverged between 2.65 and 3.18 million years ago (Mya) from the E. oryzicola and E. crus-galli.
AB - We sequenced and compared the complete chloroplast (cp) genomes of the two Echinochloa species; E. crus-galli (KT983256) and E. colona (KT983255). The size of complete chloroplast genomes of the two species are 139,851 and 139,592 base pairs in length, respectively. They include a pair of inverted repeats (22,640 and 22,618 bp) separated by the small (12,518 and 12,519 bp) and large (82,053 and 81,837 bp) single copy regions. Both chloroplast genomes include a total of 136 genes. Phylogenetic analysis revealed that E. colona was diverged between 2.65 and 3.18 million years ago (Mya) from the E. oryzicola and E. crus-galli.
KW - Chloroplast genome
KW - Echinochloa colona
KW - Echinochloa crus-galli
UR - http://www.scopus.com/inward/record.url?scp=85065787734&partnerID=8YFLogxK
U2 - 10.1080/23802359.2017.1361355
DO - 10.1080/23802359.2017.1361355
M3 - Article
AN - SCOPUS:85065787734
SN - 2380-2359
VL - 2
SP - 512
EP - 513
JO - Mitochondrial DNA Part B: Resources
JF - Mitochondrial DNA Part B: Resources
IS - 2
ER -