Therapeutic potential of circular antisense oligonucleotides in gene silencing and RNA condensate degradation

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Abstract

Antisense oligonucleotides (ASOs) have emerged as a powerful therapeutic modality for targeting disease-associated RNA. However, most clinical ASOs rely on chemical modifications to improve stability and pharmacokinetics. Here, we present a chemically unmodified circular ASO (C-ASO) platform that exhibits enhanced exonuclease resistance, prolonged gene silencing, and the ability to dissociate RNA condensates. C-ASOs are synthesized via enzymatic ligation and demonstrated superior serum stability over linear ASO (L-ASO). Notably, C-ASOs achieved durable, sequence-specific knock-down comparable to that of phosphorothioate- (PS-) and 2′-O-methoxyethyl- (2′-MOE) modified ASOs, without requiring any chemical modification. In vitro and cellular studies further showed that C-ASO efficiently degraded both synthetic and disease-relevant RNA condensates through RNase H-mediated cleavage. This approach could lead C-ASO as a potential, modification-free antisense platform that overcomes the key drawbacks of linear ASO, especially in diseases driven by pathogenic RNA condensates.

Original languageEnglish
Article number146970
JournalInternational Journal of Biological Macromolecules
Volume322
DOIs
StatePublished - Sep 2025

Keywords

  • Antisense oligonucleotide
  • Gene silencing
  • RNA condensates
  • Rolling circle transcription

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